Stabilization of two-stage anaerobic bioreactors via Port-Hamiltonian passive control
Authors
Walter E. Ortega-Muñan, René Alejandro Flores-Estrella, Ixbalank Torres-Zúñiga, Victor Alcaraz-Gonzalez
Abstract
In this work we propose a nonlinear passive control approach based on the Port-Hamiltonian framework for a multistage anaerobic digestion (AD) system. The process that we analyze has two coupled bioreactors that treat a high-strength organic wastewater. The model is introduced as a simple mass-balance equations with Monod and Haldane type kinetics. A Gibbs-free-energy-based storage function is first used to characterize the passive behavior of the open-loop process and its internal dissipation mechanisms. For controller synthesis, a separate quadratic Hamiltonian is introduced within the control-oriented IDA-PBC formulation. The controller is designed with the Interconnection and Damping Assignment Passivity-Based Control (IDA-PBC) method that reshapes the dynamics to follow a desired closed-loop energy profile. In the proposed design, the physical interconnections and biochemical constraints are kept explicit, while the desired operating point is locally stabilized without requiring model inversion. The control input acts on the dilution rate of each reactor. In this way, the main process variables, such as Chemical Oxygen Demand (COD) and Volatile Fatty Acids (VFA), stay close to their reference values, even in the presence of the influent composition perturbations. The performance of the proposed strategy is tested by numerical simulations. The numerical results show satisfactory disturbance rejection and recovery of the steady-state regime under the evaluated operating scenarios. Practical implementation will require online estimation of unmeasured biomass states and suitable computational hardware.
Keywords
anaerobic digestion, passive control, port-hamiltonian systems, two-stages, wastewater treatment
Citation
- Journal: Journal of Process Control
- Year: 2026
- Volume: 166
- Issue:
- Pages: 103812
- Publisher: Elsevier BV
- DOI: 10.1016/j.jprocont.2026.103812
BibTeX
@article{Ortega_Mu_an_2026,
title={{Stabilization of two-stage anaerobic bioreactors via Port-Hamiltonian passive control}},
volume={166},
ISSN={0959-1524},
DOI={10.1016/j.jprocont.2026.103812},
journal={Journal of Process Control},
publisher={Elsevier BV},
author={Ortega-Muñan, Walter E. and Flores-Estrella, René Alejandro and Torres-Zúñiga, Ixbalank and Alcaraz-Gonzalez, Victor},
year={2026},
pages={103812}
}References
- Bernard O, Hadj‐Sadok Z, Dochain D, Genovesi A, Steyer J (2001) Dynamical model development and parameter identification for an anaerobic wastewater treatment process. Biotech & Bioengineering 75(4):424–438. https://doi.org/10.1002/bit.1003 – 10.1002/bit.10036
- Batstone DJ, Keller J, Angelidaki I, Kalyuzhnyi SV, Pavlostathis SG, Rozzi A, Sanders WTM, Siegrist H, Vavilin VA (2002) The IWA Anaerobic Digestion Model No 1 (ADM1). Water Science and Technology 45(10):65–73. https://doi.org/10.2166/wst.2002.029 – 10.2166/wst.2002.0292
- Demirel, (2002)
- Hanaki M, Harmand J, Mghazli Z, Rapaport A, Sari T, Ugalde P (2021) Mathematical Study of a Two-Stage Anaerobic Model When the Hydrolysis Is the Limiting Step. Processes 9(11):2050. https://doi.org/10.3390/pr911205 – 10.3390/pr9112050
- Flores-Estrella, A mathematical model and dynamic analysis of anaerobic digestion of soluble organic fraction of municipal solid waste towards control design. Rev. Mex. Ing. Quím. (2016)
- Aguilar-Garnica E, Dochain D, Alcaraz-González V, González-Álvarez V (2009) A multivariable control scheme in a two-stage anaerobic digestion system described by partial differential equations. Journal of Process Control 19(8):1324–1332. https://doi.org/10.1016/j.jprocont.2009.04.00 – 10.1016/j.jprocont.2009.04.003
- Ke S, Shi Z, Fang HHP (2005) Applications of two-phase anaerobic degradation in industrial wastewater treatment. IJEP 23(1):65. https://doi.org/10.1504/ijep.2005.00639 – 10.1504/ijep.2005.006396
- He D, Wang H, Tian Y, Christov N, Simeonov I (2023) Trajectory tracking of two-stage anaerobic digestion process: A predictive control with guaranteed performance and saturated input, based on ultra-local model. Journal of Process Control 129:103039. https://doi.org/10.1016/j.jprocont.2023.10303 – 10.1016/j.jprocont.2023.103039
- Li L, Peng X, Wang X, Wu D (2018) Anaerobic digestion of food waste: A review focusing on process stability. Bioresource Technology 248:20–28. https://doi.org/10.1016/j.biortech.2017.07.01 – 10.1016/j.biortech.2017.07.012
- Christov, Recent results in two-stage anaerobic digestion systems control: A mini review. Ecol. Eng. Environ. Prot. (2024)
- Ortega, (1998)
- Bao J, Lee PL, Wang F, Zhou W (2003) Robust Process Control Based on the Passivity Theorem. Dev Chem Eng Mineral Process 11(3–4):287–308. https://doi.org/10.1002/apj.550011040 – 10.1002/apj.5500110407
- Sira-Ramirez H, Angulo-Nunez MI (1997) Passivity-based control of nonlinear chemical processes. International Journal of Control 68(5):971–996. https://doi.org/10.1080/00207179722316 – 10.1080/002071797223163
- Fossas E, Ros RM, Sira-Ramírez H (2004) Passivity-Based Control of a Bioreactor System. Journal of Mathematical Chemistry 36(4):347–360. https://doi.org/10.1023/b:jomc.0000044522.36742.4 – 10.1023/b:jomc.0000044522.36742.4b
- Makkar, Passivity based control of continuous bioreactors. Nonlinear Dyn. Syst. Theory (2017)
- Wang L, Maschke B, van der Schaft A (2018) Port-Hamiltonian modeling of non-isothermal chemical reaction networks. J Math Chem 56(6):1707–1727. https://doi.org/10.1007/s10910-018-0882- – 10.1007/s10910-018-0882-9
- Dieulot J-Y, Makkar M (2024) On The Shifted Passivity of Continuous Bioreactors. 2024 10th International Conference on Control, Decision and Information Technologies (CoDIT) 1548–155 – 10.1109/codit62066.2024.10708194
- Hoang H, Couenne F, Jallut C, Le Gorrec Y (2011) The port Hamiltonian approach to modeling and control of Continuous Stirred Tank Reactors. Journal of Process Control 21(10):1449–1458. https://doi.org/10.1016/j.jprocont.2011.06.01 – 10.1016/j.jprocont.2011.06.014
- Favache A, Dochain D (2010) Power-shaping control of reaction systems: The CSTR case. Automatica 46(11):1877–1883. https://doi.org/10.1016/j.automatica.2010.07.01 – 10.1016/j.automatica.2010.07.011
- Willems JC (1972) Dissipative dynamical systems part I: General theory. Arch Rational Mech Anal 45(5):321–351. https://doi.org/10.1007/bf0027649 – 10.1007/bf00276493
- Borja P, Ortega R, Scherpen JMA (2021) New Results on Stabilization of Port-Hamiltonian Systems via PID Passivity-Based Control. IEEE Trans Automat Contr 66(2):625–636. https://doi.org/10.1109/tac.2020.298673 – 10.1109/tac.2020.2986731
- Duan Z, Kravaris C (2017) Robust stabilization of a two‐stage continuous anaerobic bioreactor system. AIChE Journal 64(4):1295–1304. https://doi.org/10.1002/aic.1603 – 10.1002/aic.16033
- De Battista H, Jamilis M, Garelli F, Picó J (2018) Global stabilisation of continuous bioreactors: Tools for analysis and design of feeding laws. Automatica 89:340–348. https://doi.org/10.1016/j.automatica.2017.12.04 – 10.1016/j.automatica.2017.12.041
- Sira-Ramirez H (1998) A general canonical form for feedback passivity of nonlinear systems. International Journal of Control 71(5):891–905. https://doi.org/10.1080/00207179822162 – 10.1080/002071798221623
- Dörfler F, Johnsen JK, Allgöwer F (2009) An introduction to interconnection and damping assignment passivity-based control in process engineering. Journal of Process Control 19(9):1413–1426. https://doi.org/10.1016/j.jprocont.2009.07.01 – 10.1016/j.jprocont.2009.07.015
- Ortega, (2021)
- Kuznyetsov, Comparison of alternative port-Hamiltonian dynamics extensions to the thermodynamic domain toward IDA-PBC-like control: Application to a heat transfer model. Dynamics (2025)
- Badur J, Ziółkowski PJ (2026) The Port-Hamiltonian Formulation of Thermodynamics—A New Perspective. Energies 19(2):324. https://doi.org/10.3390/en1902032 – 10.3390/en19020324
- Robles Rodriguez, Modelling and parameter estimation of a two-stage anaerobic digestion system for the treatment of tequila vinasses. (2013)
- Méndez-Acosta HO, Campos-Rodríguez A, González-Álvarez V, García-Sandoval JP, Snell-Castro R, Latrille E (2016) A hybrid cascade control scheme for the VFA and COD regulation in two-stage anaerobic digestion processes. Bioresource Technology 218:1195–1202. https://doi.org/10.1016/j.biortech.2016.07.07 – 10.1016/j.biortech.2016.07.076
- Hall, (2022)
- Callen, (1985)
- Smith, (2005)
- Sbarbaro D (2018) On the Port-Hamiltonian Models of some Electrochemical Processes. IFAC-PapersOnLine 51(3):38–43. https://doi.org/10.1016/j.ifacol.2018.06.01 – 10.1016/j.ifacol.2018.06.010
- S.R. de Groot, (1984)
- Prigogine, (1967)
- Van der Schaft, (2000)
- Ortega R, van der Schaft A, Maschke B, Escobar G (2002) Interconnection and damping assignment passivity-based control of port-controlled Hamiltonian systems. Automatica 38(4):585–596. https://doi.org/10.1016/s0005-1098(01)00278- – 10.1016/s0005-1098(01)00278-3
- Khalil, (2013)
- Alcaraz-González V (2002) Software sensors for highly uncertain WWTPs: a new approach based on interval observers. Water Research 36(10):2515–2524. https://doi.org/10.1016/s0043-1354(01)00466- – 10.1016/s0043-1354(01)00466-3
- Alcaraz-González V, Harmand J, Rapaport A, Steyer JP, González-Álvarez V, Pelayo-Ortiz C (2005) Robust interval-based regulation for anaerobic digestion processes. Water Science and Technology 52(1–2):449–456. https://doi.org/10.2166/wst.2005.055 – 10.2166/wst.2005.0552
- Avilés JD, Torres-Zúñiga I, Villa-Leyva A, Vargas A, Buitrón G (2022) Experimental validation of an interval observer-based sensor fault detection strategy applied to a biohydrogen production dark fermenter. Journal of Process Control 114:131–142. https://doi.org/10.1016/j.jprocont.2022.04.01 – 10.1016/j.jprocont.2022.04.012
- Torres Zúñiga I, Villa-Leyva A, Vargas A, Buitrón G (2018) Experimental validation of online monitoring and optimization strategies applied to a biohydrogen production dark fermenter. Chemical Engineering Science 190:48–59. https://doi.org/10.1016/j.ces.2018.05.03 – 10.1016/j.ces.2018.05.039
- Rocha‐Cózatl E, Moreno JA (2010) Dissipative design of unknown input observers for systems with sector nonlinearities. Intl J Robust & Nonlinear 21(14):1623–1644. https://doi.org/10.1002/rnc.165 – 10.1002/rnc.1656
- Biedermann B, Meurer T (2021) Observer design for a class of nonlinear systems combining dissipativity with interconnection and damping assignment. Intl J Robust & Nonlinear 31(9):4064–4080. https://doi.org/10.1002/rnc.546 – 10.1002/rnc.5461
- Harmand J, Rapaport A, Dochain D (2020) Increasing the dilution rate can globally stabilize two-step biological systems. Journal of Process Control 95:67–74. https://doi.org/10.1016/j.jprocont.2020.08.00 – 10.1016/j.jprocont.2020.08.009